PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN05832.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 273aa    MW: 30702.7 Da    PI: 5.9986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN05832.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.000281091431755
                 HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 N+ f+ Lr llP++   ps   + a++ + A +YIk L+
  KHN05832.1 109 NEMFDDLRGLLPQL---PS-EADEATVIKVAANYIKGLE 143
                 99***********8...54.5667************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-6107149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.25E-4109147No hitNo description
Gene3DG3DSA:4.10.280.101.8E-5109151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.558200273IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MYHSPIFLLN PKTKPLSLSF FLFLFLSTLM AEDQGSHAID FHLGNHLLVS SNSDNSGESK  60
NNMKPLNQQN EEGEALVNKK RNREIASENE KDNITSDEGL DGKHPESNNE MFDDLRGLLP  120
QLPSEADEAT VIKVAANYIK GLEESRKRLG KITKRMFPYV FKEIMGTSDT ILINGKKKLE  180
FDKVWTSSNM VLNIHANWAQ FTVCSAYKPH LLNTITSVLE RHNIEVIAAN VSFNHNENGK  240
TCMILVHAKQ VSDENSAEET YKDASGEIFS LIS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518700.20.0PREDICTED: uncharacterized protein LOC100810704
TrEMBLA0A0B2PE220.0A0A0B2PE22_GLYSO; Uncharacterized protein
TrEMBLK7K7I90.0K7K7I9_SOYBN; Uncharacterized protein
STRINGGLYMA02G11490.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3507622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-06bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]